Target name

P08253: 72 kDa type IV collagenase


  Protein function

Ubiquitinous metalloproteinase that is involved in diverse functions such as remodeling of the vasculature, angiogenesis, tissue repair, tumor invasion, inflammation, and atherosclerotic plaque rupture. As well as degrading extracellular matrix proteins, can also act on several nonmatrix proteins such as big endothelial 1 and beta-type CGRP promoting vasoconstriction. Also cleaves KISS at a Gly-|-Leu bond. Appears to have a role in myocardial cell death pathways. Contributes to myocardial oxidative stress by regulating the activity of GSK3beta. Cleaves GSK3beta in vitro. Involved in the formation of the fibrovascular tissues in association with MMP14.

  Database links

Uniprot primary ID P08253
PDB ID 1GEN 1CK7 1CXW 1KS0 1RTG 1HOV 1EAK 1QIB 1GXD 3AYU 1J7M
DrugBank ID DB00786 DB01197
BioGrid ID 110457
GuidetoPHARMACOLOGY ID 1629
PharmGKB ID PA30877
KEGG ID hsa:4313
BioCyc MetaCyc:HS01565-MONOMER
Entrez Gene (Gene ID) 4313
DIP DIP-26N
STRING 9606ENSP00000219070
MINT
IntAct P08253
DMDM 116856
BREDNA 342424
Rectome R-HSA-1592389 R-HSA-381426 R-HSA-3928665 R-HSA-1474228 R-HSA-1442490
SignaLink
BindingDB P08253

  Model Performance Metrics

Fingerprint type F1_CV AUC_CV Accuracy_CV Sensitivity_CV Specificity_CV F1_test AUC_test Accuracy_test Sensitivity_test Specificity_test Download model
FP2 fingerprints 0.826 0.888 0.823 0.837 0.810 0.864 0.923 0.861 0.855 0.868 Download
MACCS fingerprints 0.794 0.873 0.796 0.789 0.803 0.797 0.869 0.794 0.785 0.803 Download
Daylight fingerprints 0.793 0.834 0.805 0.744 0.868 0.825 0.856 0.832 0.787 0.877 Download
ECFP2 fingerprints 0.857 0.933 0.854 0.875 0.833 0.883 0.955 0.879 0.907 0.850 Download
ECFP4 fingerprints 0.877 0.943 0.877 0.876 0.878 0.899 0.964 0.898 0.902 0.894 Download
ECFP6 fingerprints 0.870 0.940 0.873 0.852 0.894 0.906 0.961 0.906 0.901 0.911 Download

  Download datasets

Positive dataset Negative dataset


Copyright @ 2012-2014 Computational Biology & Drug Design Group,
School of Pharmaceutical Sciences, Central South University. All rights reserved.

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