Target name

P11473: Vitamin D3 receptor


  Protein function

Nuclear hormone receptor. Transcription factor that mediates the action of vitamin D3 by controlling the expression of hormone sensitive genes. Recruited to promoters via its interaction with BAZ1B/WSTF which mediates the interaction with acetylated histones, an essential step for VDR-promoter association. Plays a central role in calcium homeostasis.

  Database links

Uniprot primary ID P11473
PDB ID 3AZ2 3A78 3AZ1 2HAS 2HAR 3W0C 3W0A 3AX8 3W0Y 2HAM 4PA2 3OGT 1DB1 1YNW 4G2I 3CS6 3CS4 1KB2 1IE9 1TXI 1KB6 1KB4 2HB8 3P8X 3M7R 2HB7 3A40 3AUR 3AUQ 3TKC 1S0Z 3A2I 3A2J 4ITF 3AZ3 1IE8 3WWR 3KPZ 1S19 3A3Z 3B0T 4ITE 3WGP 3VHW
DrugBank ID DB00136 DB00153 DB01436 DB01070 DB00146 DB02300 DB00169 DB00910
BioGrid ID 113264
GuidetoPHARMACOLOGY ID 605
PharmGKB ID PA37301
KEGG ID hsa:7421
BioCyc
Entrez Gene (Gene ID) 7421
DIP DIP-32624N
STRING 9606ENSP00000447173
MINT MINT-236408
IntAct P11473
DMDM 137617
BREDNA
Rectome R-HSA-383280
SignaLink P11473
BindingDB P11473

  Model Performance Metrics

Fingerprint type F1_CV AUC_CV Accuracy_CV Sensitivity_CV Specificity_CV F1_test AUC_test Accuracy_test Sensitivity_test Specificity_test Download model
FP2 fingerprints 0.776 0.831 0.811 0.718 0.889 0.833 0.864 0.868 0.741 0.970 Download
MACCS fingerprints 0.821 0.900 0.840 0.805 0.870 0.882 0.920 0.901 0.833 0.955 Download
Daylight fingerprints 0.759 0.793 0.803 0.682 0.905 0.766 0.808 0.818 0.667 0.940 Download
ECFP2 fingerprints 0.766 0.862 0.822 0.641 0.973 0.804 0.923 0.851 0.685 0.985 Download
ECFP4 fingerprints 0.804 0.874 0.846 0.691 0.977 0.817 0.893 0.860 0.704 0.985 Download
ECFP6 fingerprints 0.807 0.867 0.849 0.695 0.977 0.826 0.884 0.868 0.704 1.000 Download

  Download datasets

Positive dataset Negative dataset


Copyright @ 2012-2014 Computational Biology & Drug Design Group,
School of Pharmaceutical Sciences, Central South University. All rights reserved.

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