Target name

P18054: Arachidonate 12-lipoxygenase, 12S-type


  Protein function

Non-heme iron-containing dioxygenase that catalyzes the stereo-specific peroxidation of free and esterified polyunsaturated fatty acids generating a spectrum of bioactive lipid mediators. Mainly converts arachidonic acid to (12S)-hydroperoxyeicosatetraenoic acid/(12S)-HPETE but can also metabolize linoleic acid. Has a dual activity since it also converts leukotriene A4/LTA4 into both the bioactive lipoxin A4/LXA4 and lipoxin B4/LXB4. Through the production of specific bioactive lipids like (12S)-HPETE it regulates different biological processes including platelet activation. It also probably positively regulates angiogenesis through regulation of the expression of the vascular endothelial growth factor. Plays a role in apoptotic process, promoting the survival of vascular smooth muscle cells for instance. May also play a role in the control of cell migration and proliferation.

  Database links

Uniprot primary ID P18054
PDB ID 2ABU 3D3L
DrugBank ID
BioGrid ID 106740
GuidetoPHARMACOLOGY ID
PharmGKB ID PA45
KEGG ID hsa:239
BioCyc MetaCyc:HS03167-MONOMER
Entrez Gene (Gene ID) 239
DIP
STRING 9606ENSP00000251535
MINT MINT-1206406
IntAct P18054
DMDM 125987838
BREDNA 1131131
Rectome R-HSA-2142712 R-HSA-2142696 R-HSA-2142700
SignaLink
BindingDB P18054

  Model Performance Metrics

Fingerprint type F1_CV AUC_CV Accuracy_CV Sensitivity_CV Specificity_CV F1_test AUC_test Accuracy_test Sensitivity_test Specificity_test Download model
FP2 fingerprints 0.545 0.590 0.545 0.600 0.500 0.444 0.669 0.590 0.476 0.650 Download
MACCS fingerprints 0.530 0.653 0.612 0.482 0.720 0.533 0.760 0.656 0.571 0.700 Download
Daylight fingerprints 0.563 0.599 0.595 0.573 0.614 0.500 0.607 0.607 0.571 0.625 Download
ECFP2 fingerprints 0.357 0.413 0.434 0.345 0.508 0.571 0.762 0.656 0.667 0.650 Download
ECFP4 fingerprints 0.482 0.585 0.529 0.482 0.568 0.553 0.781 0.656 0.619 0.675 Download
ECFP6 fingerprints 0.550 0.611 0.587 0.555 0.614 0.511 0.785 0.623 0.571 0.650 Download

  Download datasets

Positive dataset Negative dataset


Copyright @ 2012-2014 Computational Biology & Drug Design Group,
School of Pharmaceutical Sciences, Central South University. All rights reserved.

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