Target name

P42262: Glutamate receptor 2


  Protein function

Receptor for glutamate that functions as ligand-gated ion channel in the central nervous system and plays an important role in excitatory synaptic transmission. L-glutamate acts as an excitatory neurotransmitter at many synapses in the central nervous system. Binding of the excitatory neurotransmitter L-glutamate induces a conformation change, leading to the opening of the cation channel, and thereby converts the chemical signal to an electrical impulse. The receptor then desensitizes rapidly and enters a transient inactive state, characterized by the presence of bound agonist. In the presence of CACNG4 or CACNG7 or CACNG8, shows resensitization which is characterized by a delayed accumulation of current flux upon continued application of glutamate.

  Database links

Uniprot primary ID P42262
PDB ID 2XHD 2WJX 2WJW 3RNN 3RN8 3UA8 3R7X
DrugBank ID DB00898 DB01346 DB00237 DB01352 DB01353 DB01174 DB00312 DB00599 DB01354 DB01355 DB00306 DB00849 DB00241 DB00418 DB00794 DB01351
BioGrid ID 109148
GuidetoPHARMACOLOGY ID 445
PharmGKB ID PA28967
KEGG ID hsa:2891
BioCyc
Entrez Gene (Gene ID) 2891
DIP DIP-42852N
STRING 9606ENSP00000264426
MINT MINT-2791741
IntAct P42262
DMDM 23831146
BREDNA
Rectome R-HSA-416993 R-HSA-399710 R-HSA-438066
SignaLink P42262
BindingDB P42262

  Model Performance Metrics

Fingerprint type F1_CV AUC_CV Accuracy_CV Sensitivity_CV Specificity_CV F1_test AUC_test Accuracy_test Sensitivity_test Specificity_test Download model
FP2 fingerprints 0.771 0.871 0.786 0.711 0.864 0.829 0.905 0.875 0.773 0.941 Download
MACCS fingerprints 0.653 0.790 0.695 0.561 0.835 0.684 0.873 0.786 0.591 0.912 Download
Daylight fingerprints 0.670 0.781 0.737 0.526 0.955 0.722 0.773 0.821 0.591 0.971 Download
ECFP2 fingerprints 0.809 0.858 0.804 0.816 0.791 0.833 0.946 0.857 0.909 0.824 Download
ECFP4 fingerprints 0.895 0.918 0.888 0.930 0.845 0.851 0.936 0.875 0.909 0.853 Download
ECFP6 fingerprints 0.915 0.923 0.911 0.947 0.873 0.870 0.928 0.893 0.909 0.882 Download

  Download datasets

Positive dataset Negative dataset


Copyright @ 2012-2014 Computational Biology & Drug Design Group,
School of Pharmaceutical Sciences, Central South University. All rights reserved.

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