Target name

Q05586: Glutamate receptor ionotropic, NMDA 1


  Protein function

NMDA receptor subtype of glutamate-gated ion channels with high calcium permeability and voltage-dependent sensitivity to magnesium. Mediated by glycine. This protein plays a key role in synaptic plasticity, synaptogenesis, excitotoxicity, memory acquisition and learning. It mediates neuronal functions in glutamate neurotransmission. Is involved in the cell surface targeting of NMDA receptors (By similarity).

  Database links

Uniprot primary ID Q05586
PDB ID 2HQW 2NR1 3BYA
DrugBank ID DB04896 DB00996 DB01043 DB01174 DB00312 DB06151 DB00659 DB00418 DB01173 DB00454 DB08954 DB00289 DB06738
BioGrid ID 109159
GuidetoPHARMACOLOGY ID 455
PharmGKB ID PA28978
KEGG ID hsa:2902
BioCyc
Entrez Gene (Gene ID) 2902
DIP
STRING 9606ENSP00000360608
MINT MINT-1900224
IntAct Q05586
DMDM 548377
BREDNA
Rectome R-HSA-442729 R-HSA-5673001 R-HSA-3928662 R-HSA-438066 R-HSA-442982
SignaLink Q05586
BindingDB Q05586

  Model Performance Metrics

Fingerprint type F1_CV AUC_CV Accuracy_CV Sensitivity_CV Specificity_CV F1_test AUC_test Accuracy_test Sensitivity_test Specificity_test Download model
FP2 fingerprints 0.770 0.864 0.775 0.753 0.797 0.889 0.932 0.876 0.889 0.860 Download
MACCS fingerprints 0.602 0.719 0.644 0.542 0.745 0.852 0.877 0.823 0.860 0.769 Download
Daylight fingerprints 0.656 0.690 0.671 0.624 0.719 0.807 0.773 0.784 0.815 0.744 Download
ECFP2 fingerprints 0.768 0.867 0.772 0.753 0.792 0.879 0.946 0.866 0.870 0.860 Download
ECFP4 fingerprints 0.855 0.923 0.855 0.851 0.859 0.927 0.963 0.918 0.944 0.884 Download
ECFP6 fingerprints 0.874 0.934 0.878 0.840 0.917 0.954 0.966 0.948 0.963 0.930 Download

  Download datasets

Positive dataset Negative dataset


Copyright @ 2012-2014 Computational Biology & Drug Design Group,
School of Pharmaceutical Sciences, Central South University. All rights reserved.

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