Target name

Q13224: Glutamate receptor ionotropic, NMDA 2B


  Protein function

NMDA receptor subtype of glutamate-gated ion channels with high calcium permeability and voltage-dependent sensitivity to magnesium. Mediated by glycine. In concert with DAPK1 at extrasynaptic sites, acts as a central mediator for stroke damage. Its phosphorylation at Ser-1303 by DAPK1 enhances synaptic NMDA receptor channel activity inducing injurious Ca2+ influx through them, resulting in an irreversible neuronal death (By similarity).

  Database links

Uniprot primary ID Q13224
PDB ID 1S2S 2IPV 1S11
DrugBank ID DB04896 DB00996 DB00502 DB00949 DB01174 DB00312 DB06151 DB00659 DB00418 DB01043 DB00454 DB08954 DB00289 DB06738
BioGrid ID 109161
GuidetoPHARMACOLOGY ID 457
PharmGKB ID PA28980
KEGG ID hsa:2904
BioCyc
Entrez Gene (Gene ID) 2904
DIP DIP-41002N
STRING 9606ENSP00000279593
MINT MINT-127466
IntAct Q13224
DMDM 14548162
BREDNA
Rectome R-HSA-442729 R-HSA-5673001 R-HSA-3928662 R-HSA-438066 R-HSA-442982
SignaLink Q13224
BindingDB Q13224

  Model Performance Metrics

Fingerprint type F1_CV AUC_CV Accuracy_CV Sensitivity_CV Specificity_CV F1_test AUC_test Accuracy_test Sensitivity_test Specificity_test Download model
FP2 fingerprints 0.816 0.908 0.814 0.816 0.812 0.869 0.938 0.852 0.930 0.765 Download
MACCS fingerprints 0.756 0.815 0.755 0.756 0.755 0.838 0.912 0.822 0.803 0.848 Download
Daylight fingerprints 0.655 0.673 0.672 0.618 0.728 0.582 0.582 0.574 0.561 0.588 Download
ECFP2 fingerprints 0.834 0.919 0.826 0.871 0.779 0.914 0.967 0.907 0.930 0.882 Download
ECFP4 fingerprints 0.900 0.949 0.898 0.908 0.887 0.906 0.971 0.898 0.930 0.863 Download
ECFP6 fingerprints 0.907 0.953 0.907 0.899 0.915 0.929 0.975 0.926 0.912 0.941 Download

  Download datasets

Positive dataset Negative dataset


Copyright @ 2012-2014 Computational Biology & Drug Design Group,
School of Pharmaceutical Sciences, Central South University. All rights reserved.

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